FastQCFastQC Report
Mon 25 Mar 2013
45.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 45.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 30686964
Filtered Sequences 0
Sequence length 49
%GC 51

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1815300 5.915541205053716 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1417896 4.620515734303335 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1328793 4.330154654595352 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 900560 2.9346663293247257 RNA PCR Primer, Index 1 (100% over 25bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 758398 2.4714012112765538 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 388750 1.2668245708503454 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 319443 1.0409729681958764 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 295684 0.9635492126233146 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 281575 0.9175720348223435 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 234356 0.763698878781231 RNA PCR Primer, Index 1 (100% over 29bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 229725 0.74860778016359 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 224755 0.7324119779330401 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 200282 0.6526615014766531 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 189734 0.6182885996803072 RNA PCR Primer, Index 1 (100% over 25bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 178086 0.5803311138892723 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 159995 0.5213777420275267 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 151614 0.49406647070071835 RNA PCR Primer, Index 1 (100% over 29bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 134875 0.43951887843971793 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 120798 0.39364597944586505 RNA PCR Primer, Index 1 (100% over 28bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACAT 114203 0.37215476904134276 RNA PCR Primer, Index 1 (100% over 35bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 112994 0.3682149853599072 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 111510 0.3633790556797994 RNA PCR Primer, Index 1 (100% over 25bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 108464 0.3534530167272331 RNA PCR Primer, Index 1 (100% over 33bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 101077 0.32938090584653473 RNA PCR Primer, Index 1 (100% over 27bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACATG 93159 0.3035784185102182 RNA PCR Primer, Index 15 (100% over 36bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 78049 0.25433926927408 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 77745 0.25334862060645685 RNA PCR Primer, Index 1 (100% over 26bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 76883 0.2505396102397096 RNA PCR Primer, Index 1 (100% over 27bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 75437 0.2458275116430547 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 74223 0.2418714343980069 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 71993 0.23460450502695543 RNA PCR Primer, Index 1 (100% over 25bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 70251 0.2289278274644569 RNA PCR Primer, Index 1 (100% over 27bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 69014 0.2248967998267929 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 67919 0.22132850939571602 No Hit
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 67170 0.21888773356660501 RNA PCR Primer, Index 1 (100% over 25bp)
TGTAAACATCCTCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 66434 0.2164893210028858 RNA PCR Primer, Index 1 (100% over 25bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 63864 0.20811442930620314 RNA PCR Primer, Index 1 (100% over 26bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 61985 0.20199130810072968 RNA PCR Primer, Index 1 (100% over 29bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 59820 0.1949361950566371 RNA PCR Primer, Index 1 (100% over 26bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 59190 0.19288320604149695 RNA PCR Primer, Index 1 (100% over 32bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 58838 0.19173613916319648 RNA PCR Primer, Index 1 (100% over 26bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACA 58182 0.1895984236172728 RNA PCR Primer, Index 1 (100% over 34bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 57453 0.18722282204261068 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 56169 0.18303863490699177 RNA PCR Primer, Index 1 (100% over 26bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 52945 0.17253254508983032 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 51834 0.16891211525519437 RNA PCR Primer, Index 1 (100% over 25bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 50118 0.1633201642234794 No Hit
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 49206 0.1603482182206099 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 48086 0.15669845997147192 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 47265 0.1540230568263449 RNA PCR Primer, Index 1 (100% over 25bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 46009 0.14993011364695447 RNA PCR Primer, Index 1 (100% over 30bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 43823 0.14280656763569052 RNA PCR Primer, Index 1 (100% over 31bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 43797 0.14272184110490696 RNA PCR Primer, Index 1 (100% over 32bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 43436 0.14154544581210446 RNA PCR Primer, Index 1 (100% over 25bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 43200 0.14077638960960753 No Hit
ATGGGAGACCGCCTGGGAATACCGGGTGCTGTAGGCTTTGGAATTCTCG 40561 0.13217664673507618 No Hit
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 40389 0.1316161481468157 RNA PCR Primer, Index 1 (100% over 26bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 40102 0.13068089759547408 RNA PCR Primer, Index 1 (100% over 24bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 39064 0.12729835378957657 RNA PCR Primer, Index 1 (100% over 26bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 38954 0.12693989539010767 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 38341 0.12494230449124911 RNA PCR Primer, Index 1 (100% over 26bp)
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 37722 0.1229251613160559 No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 37162 0.12110028219148691 No Hit
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 36618 0.11932754247047704 RNA PCR Primer, Index 1 (100% over 27bp)
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA 35643 0.11615029756609353 No Hit
GTAGTCGTGGCCGAGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACA 34502 0.11243210634978423 RNA PCR Primer, Index 1 (100% over 34bp)
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATGGAATTCTCGGGTG 34377 0.11202476725947864 No Hit
CACTAGATTGAGAGCTCCTGGAATGGAATTCTCGGGTGCCAAGGAACTC 34328 0.11186509033607886 RNA PCR Primer, Index 1 (100% over 26bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCATGGAATTCTCGGGTGCC 34209 0.11147730352210797 No Hit
AGAGGTAGTAGGTTGCATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 33872 0.11037911733464412 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 33247 0.10834242188311623 RNA PCR Primer, Index 1 (100% over 27bp)
AGCTACATCTGGCTACTGGGTCTCTTGGAATTCTCGGGTGCCAAGGAAC 32650 0.10639697038781679 RNA PCR Primer, Index 1 (100% over 24bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGGAATTCTCGGGTGCCA 32034 0.1043896033507909 No Hit
TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 31453 0.10249629125905059 RNA PCR Primer, Index 1 (100% over 27bp)
CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT 31140 0.10147631417692542 RNA PCR Primer, Index 1 (100% over 25bp)
TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC 31017 0.10107549251206474 RNA PCR Primer, Index 1 (100% over 27bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 31130350 28.826948 310.00912 26
TTCTC 31036355 28.715986 309.27414 28
ATTCT 31032320 27.17227 293.13937 27
GCCAA 28033485 25.038206 296.45633 37
TGCCA 29535660 24.944208 280.88193 36
CCAAG 27923065 24.939583 296.58676 38
TCTCG 30963035 24.726555 266.77884 29
AACTC 23847815 24.677866 342.88898 44
GAATT 31200370 22.315014 239.94629 25
GAACT 27652675 22.101355 264.9833 43
ACTCC 19992160 21.860498 362.14404 45
CTCGG 30784480 21.21871 229.93893 30
GTGCC 29253370 20.163368 229.32887 35
GGAAT 31216860 19.270533 206.9752 24
TGGAA 30949075 19.105227 206.83415 23
CAAGG 27596010 19.036852 229.14279 39
GGAAC 26642820 18.379301 228.91023 42
AAGGA 27365095 17.86506 216.93057 40
AGGAA 26929025 17.580376 217.01518 41
CGGGT 30579040 16.279226 177.29956 32
TCGGG 30544820 16.261007 177.44377 31
GGTGC 30150105 16.050877 177.37541 34
CTCCA 12753045 13.944862 110.08713 45
GGGTG 30546445 12.560107 136.99168 33
TCCAG 10913485 9.216935 54.567554 45
CCAGT 10098235 8.52842 36.972363 7
TTGGA 13187410 7.697701 119.82383 22
CAGTC 8342205 7.045372 36.68382 43
TCACA 6029645 6.239514 44.606567 45
AGTCA 7774415 6.2136884 34.719517 44
GTCAC 6261155 5.287831 36.731876 45
GACTG 7221255 4.7104077 131.7128 11
CTGGA 7147845 4.6625223 45.88371 23
CACAT 4491535 4.6478677 41.738396 45
TCAGA 5603505 4.4785924 164.1564 8
TATCA 4699110 4.351413 185.69669 6
CAGAC 4861755 4.3422933 179.37904 9
TTATC 4807255 4.20929 175.58092 5
ACTGA 5041830 4.029674 160.51459 12
TGATG 6845765 3.9959815 117.26245 14
AGACT 4981285 3.9812837 160.95833 10
CTTAT 4541395 3.9764996 175.39326 4
CTGAT 5236070 3.9571655 151.8771 13
ATCAG 4894705 3.912085 160.77983 7
ATGGA 6080525 3.7535791 53.751507 22
AGCTT 4956720 3.7460463 151.34418 2
TAGCT 4729395 3.5742452 151.28357 1
GTGGA 6998890 3.5261257 17.676758 20
GCTTA 4566530 3.45116 151.3496 3
TGTTG 6078815 3.3551924 110.01657 17
GTTGA 5489655 3.2043986 109.40673 18
ACATG 3999285 3.1964219 28.288704 45
ATGTT 4717495 3.1904051 135.57503 16
CTTGG 5099970 3.1456501 33.94855 23
GATGT 4947120 2.8877122 117.26363 15
GTAGT 4904000 2.8625424 95.00151 5
TAGTA 3914635 2.7998106 116.24306 6
TTTGG 5019850 2.7706985 69.15108 21
TTGAC 3496205 2.6422606 90.23185 19
TAGTT 3793615 2.5655923 97.64395 18
AGTAG 4102595 2.53258 100.08876 7
TGACT 3346915 2.5294344 80.41596 20
ACTTG 3301345 2.4949946 33.01906 22
ATAGT 3485975 2.493226 104.9539 17
TTGTA 3624405 2.451157 99.18349 13
AGGTA 3934310 2.4286957 101.58775 3
GTATA 3337490 2.3870273 101.28445 15
TATAG 3330070 2.3817203 100.98957 16
TGTAT 3506845 2.371652 97.35261 14
ACTGG 3587530 2.3401372 41.90514 22
CATGA 2836555 2.2671118 22.018425 45
GGTAG 4486030 2.260116 82.800865 4
GTAGA 3521065 2.1735947 73.11155 8
AGATT 3024025 2.162832 83.983665 10
ATTGT 3173160 2.1459835 79.661125 12
TAGAT 2975390 2.1280475 83.89406 9
TGAGG 4118825 2.0751138 80.8836 1
AGTTT 3057685 2.0678885 75.30195 19
GATTG 3482775 2.0329509 69.5593 11
GAGGT 4020910 2.025783 83.08293 2
GTTTG 3647655 2.0133176 66.43021 20
GACTT 2271355 1.716579 32.660877 21
GTTGG 3265930 1.555867 24.834469 21
GATGG 2987505 1.5051411 38.73383 21
CGTGG 2821905 1.5022851 7.476918 19
TGTGG 3025765 1.4414539 10.143944 20
AGAAC 1639540 1.3858198 36.893593 15
AGTTG 2348240 1.3707049 25.495905 9
ATGAG 2203715 1.3603791 13.953184 45
CCTGG 1955325 1.3477402 5.6426277 17
CTGTT 1838035 1.3134983 35.575485 19
TCCCG 1465025 1.307403 22.281693 12
AGTGG 2519930 1.2695712 14.738537 6
TGAGC 1905390 1.2428814 12.826558 45
AACTG 1553280 1.2414565 34.327667 17
TTGAT 1822795 1.2327422 45.70462 19
CATGG 1844905 1.2034272 6.916629 23
GCTGT 1934690 1.1933126 11.473418 11
AAGAA 1490985 1.1926602 35.13971 14
ACTGT 1573010 1.1888038 32.317993 18
AAGCT 1475980 1.1796746 35.2008 1
CTGTG 1873020 1.1552746 7.819388 21
CCGTG 1671370 1.1520195 8.4804535 18
GCCTG 1653215 1.1395059 17.36105 17
AGGCT 1713760 1.1178817 14.071288 18
AGCTG 1707940 1.1140852 28.290728 2
GCTTG 1805690 1.1137457 14.57724 20
GCTGG 2052560 1.0927123 8.026893 21
GGCTT 1734650 1.0699283 16.426376 19
GCACT 1247370 1.0534608 25.869846 5
CTGCC 1163070 1.0379353 38.900192 4
CCTGT 1289755 1.0299766 19.174534 18
CACTT 1011000 0.98925245 29.332977 6
TTGAA 1365585 0.97668874 31.571857 11
GCCAG 1333320 0.9719068 32.056217 6
TCTGG 1568785 0.9676231 6.5390553 8
TCTGA 1279750 0.9671723 5.2473984 18
CAGTT 1264065 0.95531845 32.88948 8
CCCGT 1052820 0.9395471 6.40461 8
TTCAA 1009030 0.93436974 22.930922 1
TTCCC 902145 0.93276817 7.090841 6
AATCC 875860 0.90634537 19.967299 8
AGCAT 1133895 0.90626365 7.9822025 45
GAGCA 1299075 0.89615494 9.997373 45
CAGTG 1349830 0.8804909 18.965847 5
TGGCT 1418630 0.87500787 18.396616 8
GGACT 1334245 0.87032485 17.817066 4
TGCTG 1407620 0.86821693 7.428673 16
GTTCC 1086620 0.86775625 11.752359 15
GGCTG 1587895 0.8453405 7.852781 20
CAGAA 997570 0.8431952 21.981968 15
TGAAG 1350155 0.8334665 27.11805 12
CAGGA 1184080 0.8168267 17.28756 12
CACGT 964085 0.8142137 5.814027 2
TTCTG 1138890 0.81387466 9.882621 16
GAAGA 1240560 0.8098886 28.481525 13
GGCCT 1174355 0.80944353 17.577663 16
GCTAA 1009235 0.80662954 27.781406 10
GTGGT 1657830 0.78977907 8.829353 15
GCTGC 1134140 0.7817248 29.838566 3
TTGCA 1032460 0.78028274 23.401703 3
CCCGG 1009205 0.7773398 18.858593 13
CGTTC 970970 0.7754002 5.69719 4
ATTGC 1019950 0.7708282 23.488983 2
ACAGT 961740 0.768669 23.011974 4
ACCAC 664310 0.7681997 8.290761 2
GGCTA 1177010 0.7677608 18.71335 9
TGCAC 908950 0.7676497 25.88359 4
AACAT 777785 0.7616883 16.989616 1
CTGTA 1007840 0.7616761 7.079827 19
CCAGG 1027815 0.74921274 14.163719 11
CGGCC 957970 0.7378761 18.979176 15
CCACG 778110 0.7343591 6.441081 1
ATACC 704120 0.72862774 6.5092926 19
GTAGG 1436655 0.7238042 16.161692 8
CCGGC 939635 0.7237536 18.874186 14
CACAG 800045 0.71456295 26.412064 3
CAAGT 889080 0.71059567 19.94037 3
AGGAT 1150060 0.7099455 15.491355 13
CTTGT 985525 0.7042768 21.624344 8
CTAAG 875290 0.6995741 23.246956 11
TTCAC 709670 0.6944044 27.789965 1
TAGGC 1044945 0.6816152 13.295383 17
CATTG 897375 0.678192 7.0904703 2
GTGCT 1097070 0.6766704 7.3217087 15
TCGGT 1096220 0.6761461 10.911184 15
TCCTT 721940 0.6679656 8.237613 11
TTGTC 931200 0.6654551 21.566322 9
CATCT 674710 0.66019636 9.219678 6
ACGTT 864310 0.6532032 5.3256574 3
AGGTT 1118655 0.65297663 18.645742 10
TAGTG 1113455 0.6499413 6.2472014 13
GTCCC 723620 0.64576566 21.923965 11
GACCT 760740 0.6424796 5.5967145 4
TATGG 1084165 0.63284427 8.588498 22
CCCAA 543235 0.6281901 12.994087 10
CACCA 539380 0.6237322 7.5119104 1
TTTTG 967490 0.61869687 6.1926455 14
AAGTA 806630 0.6101194 18.795984 4
AAGTT 852320 0.6095932 20.371304 13
AGTTC 804345 0.6078845 21.121946 14
GTTGT 1099800 0.60703284 15.093131 12
ACATT 651910 0.60367376 16.272202 2
GTAAT 842550 0.60260546 18.023663 6
GCATC 712750 0.6019499 7.0023284 45
ACATC 579670 0.59984607 13.68005 6
TTGTG 1085770 0.5992891 6.943352 13
TGGAC 918595 0.5991973 17.336437 3
TATTG 885695 0.59898865 16.758026 1
TAAGT 837240 0.5988077 20.750711 12
CTGTC 748065 0.597392 14.663643 12
GGTTG 1251335 0.5961275 15.319417 11
TAGGT 1017800 0.59410596 17.804308 9
CAACG 660085 0.5895572 14.008749 7
TGTAG 997970 0.5825309 5.303179 11
ATCTG 770135 0.58203036 7.8484907 7
TGTCC 728040 0.5814004 19.130346 10
AAGGC 841245 0.5803251 14.8858185 18
CTACT 592035 0.5792998 9.316347 13
AGCTC 680260 0.5745106 5.1836557 13
TCAGT 755035 0.5706185 8.509403 12
AACGC 629695 0.5624143 14.344835 8
CGCCT 627725 0.56018806 5.495944 29
CTCCT 537845 0.556102 9.135233 10
CCCCC 429280 0.55427676 9.931133 1
GTCGG 1038895 0.55307186 9.589883 14
ATCCC 502895 0.54989237 15.96888 8
GTCAG 839835 0.54782236 17.118326 13
ATTCA 585160 0.5418627 16.170828 4
GTGGC 1014055 0.5398479 16.924385 7
GAAGG 1013095 0.53978616 13.638356 17
AGTAA 708535 0.53592217 18.8225 5
TCCGT 668775 0.53407234 9.5058 17
AGAAT 705810 0.53386104 6.883148 4
ATAGG 849425 0.52436 16.14756 16
CGCTG 757925 0.52241236 11.079688 10
ATCCA 503085 0.5205955 19.718723 9
TCAAG 649845 0.5193876 19.795162 2
ACGGA 752165 0.5188741 7.6565623 3
CTGGC 752575 0.51872474 6.9822426 9
AGAAG 789410 0.5153593 16.934792 16
TCGCC 576570 0.5145368 6.277672 27
GGTCT 831610 0.5129352 5.665473 19
GGATA 829830 0.5122638 15.353337 14
GCTAC 606280 0.51203114 9.327475 2
GAGTC 782535 0.5104457 17.112396 11
CATTC 521560 0.51034075 17.250168 3
AGCAG 729970 0.50356305 6.6195946 16
GAATC 628035 0.5019559 7.9083185 6
TAATC 533595 0.49411315 17.864418 7
TCCTG 615505 0.49153188 5.0245886 16
CACTG 581255 0.4908963 5.762489 6
TACTG 648815 0.49034262 7.1799836 14
TCAAC 472980 0.48944265 16.469315 6
CCACT 446810 0.48856607 7.043474 5
CACTA 471380 0.4877869 6.2753186 1
CGACC 515150 0.48618457 5.060386 3
AAGCA 574965 0.48598874 8.205168 15
CGGAA 698890 0.48212284 6.7747164 4
GATAG 777290 0.4798302 15.724206 15
TGGAG 928985 0.46803388 13.377706 9
CTGCT 585670 0.4677061 5.508511 8
AAAGC 551160 0.46586755 8.025504 14
GGAGT 924630 0.46583977 13.3795185 10
CTTTT 560200 0.46382242 7.602845 13
TAGAA 608075 0.45993617 5.8873615 19
TTCCG 571085 0.45605883 9.94787 16
CGGTG 853410 0.45432612 9.495286 16
CTACA 437635 0.45286742 11.463406 3
CCCAC 368740 0.4505728 7.9746594 4
ACCTC 411385 0.44983038 6.8395886 5
TTTGT 700395 0.44789317 9.577172 12
GTTCT 626440 0.44766712 9.722205 15
CCAAA 405515 0.4437813 10.178827 11
TCCCA 404530 0.44233477 10.169861 9
CTGGT 710465 0.43821326 7.089159 3
AAACA 416185 0.43102962 13.733539 4
TCTGT 601450 0.42980877 6.0585055 17
AGAGC 622160 0.4291913 6.5959725 11
TGTAA 597535 0.42736676 9.544598 1
GTAAA 563880 0.42650792 10.055376 2
AAAGA 532115 0.42564636 7.184374 2
GTCCG 614775 0.4237438 8.086056 6
GTTAT 623555 0.4217054 6.700683 20
ATCCT 428565 0.41934618 7.99052 8
GCAGC 571540 0.41661686 6.7924232 17
TAAAC 425020 0.41622394 13.071595 3
TGACA 520110 0.41569707 7.4013786 20
TCTCC 401750 0.4153873 9.3433695 9
CCCCG 416120 0.4149802 5.431527 10
CAAAG 489710 0.41392696 9.73324 1
CATCC 375240 0.4103075 14.211391 7
TGAGT 700970 0.4091673 8.477896 19
ACGCT 484410 0.4091063 13.364506 9
GCATT 534310 0.40380535 6.882115 1
CCCCA 328445 0.4013353 8.420283 3
AAAAG 501005 0.40076107 7.708768 13
CGACT 473420 0.39982477 8.08721 13
GACAT 500170 0.39976004 7.4282823 21
CCTTT 420715 0.38926113 8.217442 12
GGTCC 550820 0.37966177 8.1173725 5
CAAAA 365995 0.3790494 10.181483 12
TCCGA 448440 0.37872797 9.33859 7
TACCA 362450 0.3750655 5.4739385 23
TGGTC 588900 0.36323223 6.9247313 4
CAGCT 428470 0.36186242 8.452258 18
GGTGA 717665 0.36156833 7.8278527 17
TGTCG 582000 0.3589763 10.820868 13
ACTGC 424575 0.3585729 5.4458323 7
GAGTT 611520 0.35695392 6.3506103 20
TACAT 378420 0.3504199 10.012135 4
GGTTA 599085 0.3496954 5.253301 17
GTGAG 691175 0.34822232 7.4110823 18
AATTT 420050 0.34807375 5.281973 14
GTCTC 435645 0.3478987 5.8246403 20
ATCAC 330855 0.3423708 6.7158484 21
AAATT 388990 0.34088802 5.6459002 13
CAGCA 381525 0.34076038 5.7858853 3
CCGAC 360570 0.34029618 5.8139744 12
GAAGC 491555 0.33909464 6.96603 19
TCTCT 365825 0.33847484 6.5050406 21
AACGG 483170 0.33331037 7.596295 2
TTCAG 439705 0.33230752 5.990228 10
TGTTT 518915 0.33183914 6.160536 19
CCTCA 303200 0.33153513 5.118888 17
GGTTC 532370 0.32836464 5.164515 9
TGGGC 608835 0.3241228 5.081658 17
GGAAG 578915 0.30845112 5.6821933 18
TAAAT 351945 0.30842397 5.457902 12
CTCGC 340440 0.30381203 6.5999064 26
TCCCC 262470 0.30326435 6.2277284 9
CCCTC 262010 0.30273286 5.519201 16
TAATT 364560 0.30209205 5.0598407 7
TTATG 437625 0.29596242 6.7537265 21
AGCTA 368195 0.29427925 9.259237 1
GAGAG 536560 0.285884 5.1583743 10
CCCCT 245825 0.28403232 5.649404 15
TTTCC 304220 0.28147563 6.2084126 2
GCTCC 314715 0.28085482 5.3570023 14
AGTTA 361300 0.25840765 5.4665737 19
GTTCA 334905 0.25310478 6.0408826 10
TGTGC 410165 0.25298887 7.103618 14
CTAAA 247515 0.24239253 6.0449653 11
CCCGA 251130 0.23700964 5.294105 11
CATAG 292160 0.23350838 6.784611 16
CCGTA 273710 0.23116057 6.0865526 5
TTCGC 271930 0.2171587 5.0348806 27
TCACG 213205 0.18006134 5.315914 22
TTACC 181805 0.17789423 5.179387 22